1:2408661 A / G


Site Quality
54292.8
Filter Status
PASS
Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Number of Heterozygotes Homozygous Genotype Freq. Heterozygous Genotype Freq. Allele Frequency
Arab 95 204 44 7 0.4314 0.0686 0.4657
Azeri 88 200 39 10 0.39 0.1 0.44
Baloch 98 202 43 12 0.4257 0.1188 0.4851
Gilaki 65 198 31 3 0.3131 0.0303 0.3283
Kurd 71 200 32 7 0.32 0.07 0.355
Lur 62 200 24 14 0.24 0.14 0.31
Mazani 103 200 45 13 0.45 0.13 0.515
Persian 55 200 24 7 0.24 0.07 0.275
Persian Gulf Islander 86 200 32 22 0.32 0.22 0.43
Sistani 69 200 30 9 0.3 0.09 0.345
Turkmen 59 200 26 7 0.26 0.07 0.295
Zartoshti 126 200 59 8 0.59 0.08 0.63
Total 977 2404 429 119 0.35690515806988354 0.09900166389351081 0.4064
Annotations

This variant falls on 6 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.

Additional Annotations
Metric Prediction
SIFT Pred (C) ?
Polyphen2 HVAR Pred (C) ?
MutationTaster Pred (C) ?
MutationAssessor Pred (C) ?
FATHMM Pred (C) ?
FATHMM MKL Coding Pred (C) ?
N of 6 Predicted Damaging ?
N of 6 Predicted Tolerated ?
MetaSVM Pred ?
MetaLR Pred ?
GERP++ RS ?
CADD Score (Phred Scale) 1.246
Ada Score ?
RF Score ?
PDIVAS Score ?
ConSplice Score ?
REVEL Score ?

Quality Metrics

Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above