1:2409892 A / G


Site Quality
1353700.0
Filter Status
PASS
Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Number of Heterozygotes Homozygous Genotype Freq. Heterozygous Genotype Freq. Allele Frequency
Arab 131 204 51 29 0.5 0.2843 0.6422
Azeri 129 200 39 51 0.39 0.51 0.645
Baloch 125 202 40 45 0.396 0.4455 0.6188
Gilaki 128 198 44 40 0.4444 0.404 0.6465
Kurd 109 200 34 41 0.34 0.41 0.545
Lur 123 200 39 45 0.39 0.45 0.615
Mazani 124 200 36 52 0.36 0.52 0.62
Persian 118 200 36 46 0.36 0.46 0.59
Persian Gulf Islander 119 200 32 55 0.32 0.55 0.595
Sistani 132 200 41 50 0.41 0.5 0.66
Turkmen 138 200 48 42 0.48 0.42 0.69
Zartoshti 151 200 61 29 0.61 0.29 0.755
Total 1527 2404 501 525 0.4168053244592346 0.4367720465890183 0.6352
Annotations

This variant falls on 6 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.

Additional Annotations
Metric Prediction
SIFT Pred (C) ?
Polyphen2 HVAR Pred (C) ?
MutationTaster Pred (C) ?
MutationAssessor Pred (C) ?
FATHMM Pred (C) ?
FATHMM MKL Coding Pred (C) ?
N of 6 Predicted Damaging ?
N of 6 Predicted Tolerated ?
MetaSVM Pred ?
MetaLR Pred ?
GERP++ RS ?
CADD Score (Phred Scale) 0.159
Ada Score ?
RF Score ?
PDIVAS Score ?
ConSplice Score ?
REVEL Score ?

Quality Metrics

Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above