1:2410789 C / T


Site Quality
42172.5
Filter Status
PASS
Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Number of Heterozygotes Homozygous Genotype Freq. Heterozygous Genotype Freq. Allele Frequency
Arab 55 204 25 5 0.2451 0.049 0.2696
Azeri 55 200 24 7 0.24 0.07 0.275
Baloch 84 202 41 2 0.4059 0.0198 0.4158
Gilaki 80 198 37 6 0.3737 0.0606 0.404
Kurd 55 200 26 3 0.26 0.03 0.275
Lur 47 200 22 3 0.22 0.03 0.235
Mazani 104 200 45 14 0.45 0.14 0.52
Persian 19 200 9 1 0.09 0.01 0.095
Persian Gulf Islander 83 200 38 7 0.38 0.07 0.415
Sistani 72 200 31 10 0.31 0.1 0.36
Turkmen 38 200 17 4 0.17 0.04 0.19
Zartoshti 133 200 60 13 0.6 0.13 0.665
Total 825 2404 375 75 0.3119800332778702 0.06239600665557404 0.3432
Annotations

This variant falls on 7 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.

Additional Annotations
Metric Prediction
SIFT Pred (C) ?
Polyphen2 HVAR Pred (C) ?
MutationTaster Pred (C) ?
MutationAssessor Pred (C) ?
FATHMM Pred (C) ?
FATHMM MKL Coding Pred (C) ?
N of 6 Predicted Damaging ?
N of 6 Predicted Tolerated ?
MetaSVM Pred ?
MetaLR Pred ?
GERP++ RS ?
CADD Score (Phred Scale) 1.402
Ada Score ?
RF Score ?
PDIVAS Score ?
ConSplice Score ?
REVEL Score ?

Quality Metrics

Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above