1:2412279 A / T


Site Quality
16030.2
Filter Status
PASS
Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Number of Heterozygotes Homozygous Genotype Freq. Heterozygous Genotype Freq. Allele Frequency
Arab 28 204 13 2 0.1275 0.0196 0.1373
Azeri 40 200 20 0 0.2 0.0 0.2
Baloch 33 202 15 3 0.1485 0.0297 0.1634
Gilaki 39 198 19 1 0.1919 0.0101 0.197
Kurd 24 200 11 2 0.11 0.02 0.12
Lur 31 200 14 3 0.14 0.03 0.155
Mazani 64 200 27 10 0.27 0.1 0.32
Persian 15 200 7 1 0.07 0.01 0.075
Persian Gulf Islander 48 200 22 4 0.22 0.04 0.24
Sistani 39 200 17 5 0.17 0.05 0.195
Turkmen 21 200 10 1 0.1 0.01 0.105
Zartoshti 80 200 37 6 0.37 0.06 0.4
Total 462 2404 212 38 0.17637271214642264 0.03161397670549085 0.1922
Annotations

This variant falls on 7 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.

Additional Annotations
Metric Prediction
SIFT Pred (C) ?
Polyphen2 HVAR Pred (C) ?
MutationTaster Pred (C) ?
MutationAssessor Pred (C) ?
FATHMM Pred (C) ?
FATHMM MKL Coding Pred (C) ?
N of 6 Predicted Damaging ?
N of 6 Predicted Tolerated ?
MetaSVM Pred ?
MetaLR Pred ?
GERP++ RS ?
CADD Score (Phred Scale) 2.006
Ada Score ?
RF Score ?
PDIVAS Score ?
ConSplice Score ?
REVEL Score ?

Quality Metrics

Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above