1:2417958 G / A


Site Quality
31377.2
Filter Status
PASS
Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Number of Heterozygotes Homozygous Genotype Freq. Heterozygous Genotype Freq. Allele Frequency
Arab 47 204 21 5 0.2059 0.049 0.2304
Azeri 49 200 22 5 0.22 0.05 0.245
Baloch 62 202 28 6 0.2772 0.0594 0.3069
Gilaki 46 198 22 2 0.2222 0.0202 0.2323
Kurd 45 200 20 5 0.2 0.05 0.225
Lur 46 200 22 2 0.22 0.02 0.23
Mazani 73 200 28 17 0.28 0.17 0.365
Persian 29 200 12 5 0.12 0.05 0.145
Persian Gulf Islander 59 200 25 9 0.25 0.09 0.295
Sistani 88 200 35 18 0.35 0.18 0.44
Turkmen 45 200 21 3 0.21 0.03 0.225
Zartoshti 96 200 44 8 0.44 0.08 0.48
Total 685 2404 300 85 0.24958402662229617 0.07071547420965059 0.2849
Annotations

This variant falls on 7 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.

Additional Annotations
Metric Prediction
SIFT Pred (C) ?
Polyphen2 HVAR Pred (C) ?
MutationTaster Pred (C) ?
MutationAssessor Pred (C) ?
FATHMM Pred (C) ?
FATHMM MKL Coding Pred (C) ?
N of 6 Predicted Damaging ?
N of 6 Predicted Tolerated ?
MetaSVM Pred ?
MetaLR Pred ?
GERP++ RS ?
CADD Score (Phred Scale) 1.475
Ada Score ?
RF Score ?
PDIVAS Score ?
ConSplice Score ?
REVEL Score ?

Quality Metrics

Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above