1:2418935 C / T


Site Quality
346252.0
Filter Status
PASS
Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Number of Heterozygotes Homozygous Genotype Freq. Heterozygous Genotype Freq. Allele Frequency
Arab 124 204 44 36 0.4314 0.3529 0.6078
Azeri 113 200 38 37 0.38 0.37 0.565
Baloch 120 202 36 48 0.3564 0.4752 0.5941
Gilaki 135 198 46 43 0.4646 0.4343 0.6818
Kurd 111 200 37 37 0.37 0.37 0.555
Lur 121 200 43 35 0.43 0.35 0.605
Mazani 125 200 36 53 0.36 0.53 0.625
Persian 107 200 37 33 0.37 0.33 0.535
Persian Gulf Islander 115 200 33 49 0.33 0.49 0.575
Sistani 123 200 35 53 0.35 0.53 0.615
Turkmen 87 200 31 25 0.31 0.25 0.435
Zartoshti 149 200 60 29 0.6 0.29 0.745
Total 1430 2404 476 478 0.39600665557404324 0.39767054908485855 0.5948
Annotations

This variant falls on 7 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.

Additional Annotations
Metric Prediction
SIFT Pred (C) ?
Polyphen2 HVAR Pred (C) ?
MutationTaster Pred (C) ?
MutationAssessor Pred (C) ?
FATHMM Pred (C) ?
FATHMM MKL Coding Pred (C) ?
N of 6 Predicted Damaging ?
N of 6 Predicted Tolerated ?
MetaSVM Pred ?
MetaLR Pred ?
GERP++ RS ?
CADD Score (Phred Scale) 0.321
Ada Score ?
RF Score ?
PDIVAS Score ?
ConSplice Score ?
REVEL Score ?

Quality Metrics

Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above