1:2420590 T / C


Site Quality
955740.0
Filter Status
PASS
Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Number of Heterozygotes Homozygous Genotype Freq. Heterozygous Genotype Freq. Allele Frequency
Arab 153 204 61 31 0.598 0.3039 0.75
Azeri 144 200 53 38 0.53 0.38 0.72
Baloch 148 202 53 42 0.5248 0.4158 0.7327
Gilaki 161 198 63 35 0.6364 0.3535 0.8131
Kurd 139 200 50 39 0.5 0.39 0.695
Lur 155 200 59 37 0.59 0.37 0.775
Mazani 145 200 49 47 0.49 0.47 0.725
Persian 140 200 52 36 0.52 0.36 0.7
Persian Gulf Islander 134 200 47 40 0.47 0.4 0.67
Sistani 160 200 62 36 0.62 0.36 0.8
Turkmen 157 200 66 25 0.66 0.25 0.785
Zartoshti 163 200 70 23 0.7 0.23 0.815
Total 1799 2404 685 429 0.569883527454243 0.35690515806988354 0.7483
Annotations

This variant falls on 7 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.

Additional Annotations
Metric Prediction
SIFT Pred (C) ?
Polyphen2 HVAR Pred (C) ?
MutationTaster Pred (C) ?
MutationAssessor Pred (C) ?
FATHMM Pred (C) ?
FATHMM MKL Coding Pred (C) ?
N of 6 Predicted Damaging ?
N of 6 Predicted Tolerated ?
MetaSVM Pred ?
MetaLR Pred ?
GERP++ RS ?
CADD Score (Phred Scale) 4.505
Ada Score ?
RF Score ?
PDIVAS Score ?
ConSplice Score ?
REVEL Score ?

Quality Metrics

Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above