1:2424417 T / C


Site Quality
23829.7
Filter Status
PASS
Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Number of Heterozygotes Homozygous Genotype Freq. Heterozygous Genotype Freq. Allele Frequency
Arab 42 204 20 2 0.1961 0.0196 0.2059
Azeri 37 200 17 3 0.17 0.03 0.185
Baloch 52 202 24 4 0.2376 0.0396 0.2574
Gilaki 35 198 17 1 0.1717 0.0101 0.1768
Kurd 39 200 19 1 0.19 0.01 0.195
Lur 46 200 21 4 0.21 0.04 0.23
Mazani 71 200 33 5 0.33 0.05 0.355
Persian 21 200 10 1 0.1 0.01 0.105
Persian Gulf Islander 57 200 27 3 0.27 0.03 0.285
Sistani 65 200 30 5 0.3 0.05 0.325
Turkmen 22 200 11 0 0.11 0.0 0.11
Zartoshti 109 200 53 3 0.53 0.03 0.545
Total 596 2404 282 32 0.23460898502495842 0.026622296173044926 0.2479
Annotations

This variant falls on 8 transcripts in 2 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.

Additional Annotations
Metric Prediction
SIFT Pred (C) ?
Polyphen2 HVAR Pred (C) ?
MutationTaster Pred (C) ?
MutationAssessor Pred (C) ?
FATHMM Pred (C) ?
FATHMM MKL Coding Pred (C) ?
N of 6 Predicted Damaging ?
N of 6 Predicted Tolerated ?
MetaSVM Pred ?
MetaLR Pred ?
GERP++ RS ?
CADD Score (Phred Scale) 2.778
Ada Score ?
RF Score ?
PDIVAS Score ?
ConSplice Score ?
REVEL Score ?

Quality Metrics

Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above