1:2426313 G / A


Site Quality
28006.5
Filter Status
PASS
Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Number of Heterozygotes Homozygous Genotype Freq. Heterozygous Genotype Freq. Allele Frequency
Arab 2 204 0 2 0.0 0.0196 0.009804
Azeri 3 200 0 3 0.0 0.03 0.015
Baloch 0 202 0 0 0.0 0.0 0
Gilaki 3 198 0 3 0.0 0.0303 0.01515
Kurd 3 200 0 3 0.0 0.03 0.015
Lur 2 200 0 2 0.0 0.02 0.01
Mazani 3 200 0 3 0.0 0.03 0.015
Persian 1 200 0 1 0.0 0.01 0.005
Persian Gulf Islander 3 200 0 3 0.0 0.03 0.015
Sistani 0 200 0 0 0.0 0.0 0
Turkmen 2 200 0 2 0.0 0.02 0.01
Zartoshti 1 200 0 1 0.0 0.01 0.005
Total 23 2404 0 23 0.0 0.01913477537437604 0.009567

Additional Annotations
Metric Prediction
SIFT Pred (C) Tolerated
Polyphen2 HVAR Pred (C) Benign
MutationTaster Pred (C) Tolerated
MutationAssessor Pred (C) Predicted functional (medium)
FATHMM Pred (C) Tolerated
FATHMM MKL Coding Pred (C) Tolerated
N of 6 Predicted Damaging 1 of 6 Predicted as Damaging
N of 6 Predicted Tolerated 5 of 6 Predicted as Tolerated
MetaSVM Pred Tolerated
MetaLR Pred Tolerated
GERP++ RS 0.0929
CADD Score (Phred Scale) 7.228
Ada Score ?
RF Score ?
PDIVAS Score ?
ConSplice Score ?
REVEL Score 0.021

Quality Metrics

Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above