1:2426689 C / T


Site Quality
19162.5
Filter Status
PASS
Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Number of Heterozygotes Homozygous Genotype Freq. Heterozygous Genotype Freq. Allele Frequency
Arab 17 204 3 11 0.0294 0.1078 0.08333
Azeri 19 200 7 5 0.07 0.05 0.095
Baloch 33 202 6 21 0.0594 0.2079 0.1634
Gilaki 17 198 4 9 0.0404 0.0909 0.08586
Kurd 19 200 5 9 0.05 0.09 0.095
Lur 11 200 4 3 0.04 0.03 0.055
Mazani 32 200 7 18 0.07 0.18 0.16
Persian 15 200 6 3 0.06 0.03 0.075
Persian Gulf Islander 41 200 12 17 0.12 0.17 0.205
Sistani 46 200 12 22 0.12 0.22 0.23
Turkmen 20 200 8 4 0.08 0.04 0.1
Zartoshti 27 200 5 17 0.05 0.17 0.135
Total 297 2404 79 139 0.06572379367720466 0.11564059900166389 0.1235
Annotations

This variant falls on 7 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.

Additional Annotations
Metric Prediction
SIFT Pred (C) ?
Polyphen2 HVAR Pred (C) ?
MutationTaster Pred (C) ?
MutationAssessor Pred (C) ?
FATHMM Pred (C) ?
FATHMM MKL Coding Pred (C) ?
N of 6 Predicted Damaging ?
N of 6 Predicted Tolerated ?
MetaSVM Pred ?
MetaLR Pred ?
GERP++ RS ?
CADD Score (Phred Scale) 4.936
Ada Score ?
RF Score ?
PDIVAS Score ?
ConSplice Score ?
REVEL Score ?

Quality Metrics

Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above