1:2428874 T / C


Site Quality
1161530.0
Filter Status
PASS
Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Number of Heterozygotes Homozygous Genotype Freq. Heterozygous Genotype Freq. Allele Frequency
Arab 150 204 61 28 0.598 0.2745 0.7353
Azeri 135 200 45 45 0.45 0.45 0.675
Baloch 145 202 51 43 0.505 0.4257 0.7178
Gilaki 155 198 59 37 0.596 0.3737 0.7828
Kurd 132 200 47 38 0.47 0.38 0.66
Lur 143 200 50 43 0.5 0.43 0.715
Mazani 138 200 46 46 0.46 0.46 0.69
Persian 140 200 50 40 0.5 0.4 0.7
Persian Gulf Islander 138 200 49 40 0.49 0.4 0.69
Sistani 162 200 65 32 0.65 0.32 0.81
Turkmen 157 200 64 29 0.64 0.29 0.785
Zartoshti 166 200 71 24 0.71 0.24 0.83
Total 1761 2404 658 445 0.5474209650582362 0.370216306156406 0.7325
Annotations

This variant falls on 7 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.

Additional Annotations
Metric Prediction
SIFT Pred (C) ?
Polyphen2 HVAR Pred (C) ?
MutationTaster Pred (C) ?
MutationAssessor Pred (C) ?
FATHMM Pred (C) ?
FATHMM MKL Coding Pred (C) ?
N of 6 Predicted Damaging ?
N of 6 Predicted Tolerated ?
MetaSVM Pred ?
MetaLR Pred ?
GERP++ RS ?
CADD Score (Phred Scale) 1.336
Ada Score ?
RF Score ?
PDIVAS Score ?
ConSplice Score ?
REVEL Score ?

Quality Metrics

Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above