1:2430250 G / A


Site Quality
3331.08
Filter Status
PASS
Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Number of Heterozygotes Homozygous Genotype Freq. Heterozygous Genotype Freq. Allele Frequency
Arab 1 204 0 1 0.0 0.0098 0.004902
Azeri 0 200 0 0 0.0 0.0 0
Baloch 0 202 0 0 0.0 0.0 0
Gilaki 0 198 0 0 0.0 0.0 0
Kurd 4 200 0 4 0.0 0.04 0.02
Lur 0 200 0 0 0.0 0.0 0
Mazani 0 200 0 0 0.0 0.0 0
Persian 0 200 0 0 0.0 0.0 0
Persian Gulf Islander 0 200 0 0 0.0 0.0 0
Sistani 0 200 0 0 0.0 0.0 0
Turkmen 0 200 0 0 0.0 0.0 0
Zartoshti 0 200 0 0 0.0 0.0 0
Total 5 2404 0 5 0.0 0.004159733777038269 0.00208

Additional Annotations
Metric Prediction
SIFT Pred (C) Damaging
Polyphen2 HVAR Pred (C) Probably damaging
MutationTaster Pred (C) Damaging
MutationAssessor Pred (C) Predicted non-functional (low)
FATHMM Pred (C) Tolerated
FATHMM MKL Coding Pred (C) Damaging
N of 6 Predicted Damaging 4 of 6 Predicted as Damaging
N of 6 Predicted Tolerated 2 of 6 Predicted as Tolerated
MetaSVM Pred Damaging
MetaLR Pred Tolerated
GERP++ RS 4.93
CADD Score (Phred Scale) 27.8
Ada Score ?
RF Score ?
PDIVAS Score ?
ConSplice Score ?
REVEL Score 0.142,0.709

Quality Metrics

Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above