1:2435352 T / C

dbSNP
rs1377858966
Allele Frequency
0.02745
Allele Count
66 / 2404
UCSC
1-2435352-T-C
ClinVar
Click to search for variant in Clinvar
Ensembl
Click to search for variant in Ensembl
gnomAD Browser
Click to search for variant in gnomAD Browser
Site Quality
1684.46
Filter Status
PASS
 Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Number of Heterozygotes Homozygous Genotype Freq. Heterozygous Genotype Freq. Allele Frequency
Arab 10 204 0 10 0.0 0.098 0.04902
Azeri 11 200 0 11 0.0 0.11 0.055
Baloch 0 202 0 0 0.0 0.0 0
Gilaki 0 198 0 0 0.0 0.0 0
Kurd 11 200 0 11 0.0 0.11 0.055
Lur 7 200 0 7 0.0 0.07 0.035
Mazani 0 200 0 0 0.0 0.0 0
Persian 9 200 0 9 0.0 0.09 0.045
Persian Gulf Islander 8 200 0 8 0.0 0.08 0.04
Sistani 0 200 0 0 0.0 0.0 0
Turkmen 10 200 0 10 0.0 0.1 0.05
Zartoshti 0 200 0 0 0.0 0.0 0
Total 66 2404 0 66 0.0 0.05490848585690516 0.02745
Annotations

This variant falls on 8 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.

Additional Annotations
Metric Prediction
SIFT Pred (C) ?
Polyphen2 HVAR Pred (C) ?
MutationTaster Pred (C) ?
MutationAssessor Pred (C) ?
FATHMM Pred (C) ?
FATHMM MKL Coding Pred (C) ?
N of 6 Predicted Damaging ?
N of 6 Predicted Tolerated ?
MetaSVM Pred ?
MetaLR Pred ?
GERP++ RS ?
CADD Score (Phred Scale) 2.606
Ada Score 0.00390374
RF Score 0.062
PDIVAS Score ?
ConSplice Score ?
REVEL Score ?

Quality Metrics

Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above