1:2436778 A / G


Site Quality
21987.2
Filter Status
PASS
Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Number of Heterozygotes Homozygous Genotype Freq. Heterozygous Genotype Freq. Allele Frequency
Arab 23 204 7 9 0.0686 0.0882 0.1127
Azeri 36 200 12 12 0.12 0.12 0.18
Baloch 46 202 12 22 0.1188 0.2178 0.2277
Gilaki 11 198 5 1 0.0505 0.0101 0.05556
Kurd 28 200 9 10 0.09 0.1 0.14
Lur 23 200 9 5 0.09 0.05 0.115
Mazani 29 200 9 11 0.09 0.11 0.145
Persian 11 200 4 3 0.04 0.03 0.055
Persian Gulf Islander 66 200 21 24 0.21 0.24 0.33
Sistani 28 200 10 8 0.1 0.08 0.14
Turkmen 24 200 10 4 0.1 0.04 0.12
Zartoshti 23 200 4 15 0.04 0.15 0.115
Total 348 2404 112 124 0.09317803660565724 0.10316139767054909 0.1448
Annotations

This variant falls on 7 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.

Additional Annotations
Metric Prediction
SIFT Pred (C) ?
Polyphen2 HVAR Pred (C) ?
MutationTaster Pred (C) ?
MutationAssessor Pred (C) ?
FATHMM Pred (C) ?
FATHMM MKL Coding Pred (C) ?
N of 6 Predicted Damaging ?
N of 6 Predicted Tolerated ?
MetaSVM Pred ?
MetaLR Pred ?
GERP++ RS ?
CADD Score (Phred Scale) 5.413
Ada Score ?
RF Score ?
PDIVAS Score ?
ConSplice Score ?
REVEL Score ?

Quality Metrics

Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above