1:990806 G / A


Site Quality
40222.1
Filter Status
PASS
Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Number of Heterozygotes Homozygous Genotype Freq. Heterozygous Genotype Freq. Allele Frequency
Arab 60 204 30 0 0.2941 0.0 0.2941
Azeri 72 200 36 0 0.36 0.0 0.36
Baloch 89 202 43 3 0.4257 0.0297 0.4406
Gilaki 47 198 23 1 0.2323 0.0101 0.2374
Kurd 57 200 26 5 0.26 0.05 0.285
Lur 52 200 25 2 0.25 0.02 0.26
Mazani 104 200 48 8 0.48 0.08 0.52
Persian 59 200 28 3 0.28 0.03 0.295
Persian Gulf Islander 86 200 41 4 0.41 0.04 0.43
Sistani 107 200 51 5 0.51 0.05 0.535
Turkmen 56 200 27 2 0.27 0.02 0.28
Zartoshti 93 200 42 9 0.42 0.09 0.465
Total 882 2404 420 42 0.34941763727121466 0.03494176372712146 0.3669
Annotations

This variant falls on 3 transcripts in 2 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.

Additional Annotations
Metric Prediction
SIFT Pred (C) ?
Polyphen2 HVAR Pred (C) ?
MutationTaster Pred (C) ?
MutationAssessor Pred (C) ?
FATHMM Pred (C) ?
FATHMM MKL Coding Pred (C) ?
N of 6 Predicted Damaging ?
N of 6 Predicted Tolerated ?
MetaSVM Pred ?
MetaLR Pred ?
GERP++ RS ?
CADD Score (Phred Scale) 5.891
Ada Score ?
RF Score ?
PDIVAS Score ?
ConSplice Score ?
REVEL Score ?

Quality Metrics

Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above