12:21590686 C / A


Site Quality
5025.01
Filter Status
PASS
Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Number of Heterozygotes Homozygous Genotype Freq. Heterozygous Genotype Freq. Allele Frequency
Arab 0 204 0 0 0.0 0.0 0
Azeri 0 200 0 0 0.0 0.0 0
Baloch 0 202 0 0 0.0 0.0 0
Gilaki 0 198 0 0 0.0 0.0 0
Kurd 0 200 0 0 0.0 0.0 0
Lur 0 200 0 0 0.0 0.0 0
Mazani 0 200 0 0 0.0 0.0 0
Persian 0 200 0 0 0.0 0.0 0
Persian Gulf Islander 0 200 0 0 0.0 0.0 0
Sistani 0 200 0 0 0.0 0.0 0
Turkmen 0 200 0 0 0.0 0.0 0
Zartoshti 8 200 0 8 0.0 0.08 0.04
Total 8 2404 0 8 0.0 0.0066555740432612314 0.003328

Additional Annotations
Metric Prediction
SIFT Pred (C) Tolerated
Polyphen2 HVAR Pred (C) Benign
MutationTaster Pred (C) Tolerated
MutationAssessor Pred (C) Predicted non-functional (neutral)
FATHMM Pred (C) ?
FATHMM MKL Coding Pred (C) Tolerated
N of 6 Predicted Damaging 0 of 6 Predicted as Damaging
N of 6 Predicted Tolerated 5 of 6 Predicted as Tolerated
MetaSVM Pred Tolerated
MetaLR Pred Tolerated
GERP++ RS -5.93
CADD Score (Phred Scale) 0.052
Ada Score ?
RF Score ?
PDIVAS Score ?
ConSplice Score ?
REVEL Score 0.014

Quality Metrics

Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above