12:21599006 A / G


Site Quality
9461.08
Filter Status
PASS
Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Number of Heterozygotes Homozygous Genotype Freq. Heterozygous Genotype Freq. Allele Frequency
Arab 20 204 9 2 0.0882 0.0196 0.09804
Azeri 15 200 7 1 0.07 0.01 0.075
Baloch 17 202 8 1 0.0792 0.0099 0.08416
Gilaki 31 198 13 5 0.1313 0.0505 0.1566
Kurd 19 200 8 3 0.08 0.03 0.095
Lur 8 200 4 0 0.04 0.0 0.04
Mazani 37 200 15 7 0.15 0.07 0.185
Persian 12 200 6 0 0.06 0.0 0.06
Persian Gulf Islander 32 200 13 6 0.13 0.06 0.16
Sistani 32 200 15 2 0.15 0.02 0.16
Turkmen 24 200 12 0 0.12 0.0 0.12
Zartoshti 53 200 24 5 0.24 0.05 0.265
Total 300 2404 134 32 0.11148086522462562 0.026622296173044926 0.1248
Annotations

This variant falls on 6 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.

Additional Annotations
Metric Prediction
SIFT Pred (C) ?
Polyphen2 HVAR Pred (C) ?
MutationTaster Pred (C) ?
MutationAssessor Pred (C) ?
FATHMM Pred (C) ?
FATHMM MKL Coding Pred (C) ?
N of 6 Predicted Damaging ?
N of 6 Predicted Tolerated ?
MetaSVM Pred ?
MetaLR Pred ?
GERP++ RS ?
CADD Score (Phred Scale) 3.475
Ada Score ?
RF Score ?
PDIVAS Score ?
ConSplice Score ?
REVEL Score ?

Quality Metrics

Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above