12:21602793 TTTTTTTTTTTT / _


Site Quality
388276.0
Filter Status
PASS
Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Number of Heterozygotes Homozygous Genotype Freq. Heterozygous Genotype Freq. Allele Frequency
Arab 98 204 28 42 0.2745 0.4118 0.4804
Azeri 118 200 42 34 0.42 0.34 0.59
Baloch 97 202 22 53 0.2178 0.5248 0.4802
Gilaki 94 198 33 28 0.3333 0.2828 0.4747
Kurd 97 200 23 51 0.23 0.51 0.485
Lur 99 200 36 27 0.36 0.27 0.495
Mazani 95 200 24 47 0.24 0.47 0.475
Persian 100 200 33 34 0.33 0.34 0.5
Persian Gulf Islander 109 200 30 49 0.3 0.49 0.545
Sistani 84 200 20 44 0.2 0.44 0.42
Turkmen 62 200 21 20 0.21 0.2 0.31
Zartoshti 120 200 36 48 0.36 0.48 0.6
Total 1173 2404 348 477 0.2895174708818636 0.3968386023294509 0.4879
Annotations

This variant falls on 6 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.

Additional Annotations
Metric Prediction
SIFT Pred (C) ?
Polyphen2 HVAR Pred (C) ?
MutationTaster Pred (C) ?
MutationAssessor Pred (C) ?
FATHMM Pred (C) ?
FATHMM MKL Coding Pred (C) ?
N of 6 Predicted Damaging ?
N of 6 Predicted Tolerated ?
MetaSVM Pred ?
MetaLR Pred ?
GERP++ RS ?
CADD Score (Phred Scale) 5.06
Ada Score ?
RF Score ?
PDIVAS Score ?
ConSplice Score ?
REVEL Score ?

Quality Metrics

Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above