12:21614142 AATTT / _


Site Quality
376680.0
Filter Status
PASS
Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Number of Heterozygotes Homozygous Genotype Freq. Heterozygous Genotype Freq. Allele Frequency
Arab 85 204 25 35 0.2451 0.3431 0.4167
Azeri 86 200 27 32 0.27 0.32 0.43
Baloch 96 202 22 52 0.2178 0.5149 0.4752
Gilaki 75 198 19 37 0.1919 0.3737 0.3788
Kurd 83 200 21 41 0.21 0.41 0.415
Lur 85 200 28 29 0.28 0.29 0.425
Mazani 92 200 25 42 0.25 0.42 0.46
Persian 78 200 25 28 0.25 0.28 0.39
Persian Gulf Islander 97 200 26 45 0.26 0.45 0.485
Sistani 72 200 20 32 0.2 0.32 0.36
Turkmen 42 200 12 18 0.12 0.18 0.21
Zartoshti 120 200 37 46 0.37 0.46 0.6
Total 1011 2404 287 437 0.23876871880199668 0.36356073211314477 0.4205
Annotations

This variant falls on 7 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.

Additional Annotations
Metric Prediction
SIFT Pred (C) ?
Polyphen2 HVAR Pred (C) ?
MutationTaster Pred (C) ?
MutationAssessor Pred (C) ?
FATHMM Pred (C) ?
FATHMM MKL Coding Pred (C) ?
N of 6 Predicted Damaging ?
N of 6 Predicted Tolerated ?
MetaSVM Pred ?
MetaLR Pred ?
GERP++ RS ?
CADD Score (Phred Scale) 7.805
Ada Score ?
RF Score ?
PDIVAS Score ?
ConSplice Score ?
REVEL Score ?

Quality Metrics

Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above