12:21616598 C / T

dbSNP
rs11046073
Allele Frequency
0.02454
Allele Count
59 / 2404
UCSC
12-21616598-C-T
ClinVar
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Ensembl
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gnomAD Browser
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Site Quality
1382.95
Filter Status
PASS
 Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Number of Heterozygotes Homozygous Genotype Freq. Heterozygous Genotype Freq. Allele Frequency
Arab 4 204 2 0 0.0196 0.0 0.01961
Azeri 8 200 4 0 0.04 0.0 0.04
Baloch 10 202 4 2 0.0396 0.0198 0.0495
Gilaki 0 198 0 0 0.0 0.0 0
Kurd 0 200 0 0 0.0 0.0 0
Lur 0 200 0 0 0.0 0.0 0
Mazani 4 200 2 0 0.02 0.0 0.02
Persian 0 200 0 0 0.0 0.0 0
Persian Gulf Islander 11 200 5 1 0.05 0.01 0.055
Sistani 8 200 4 0 0.04 0.0 0.04
Turkmen 2 200 1 0 0.01 0.0 0.01
Zartoshti 12 200 6 0 0.06 0.0 0.06
Total 59 2404 28 3 0.02329450915141431 0.0024958402662229617 0.02454
Annotations

This variant falls on 5 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.

Additional Annotations
Metric Prediction
SIFT Pred (C) ?
Polyphen2 HVAR Pred (C) ?
MutationTaster Pred (C) ?
MutationAssessor Pred (C) ?
FATHMM Pred (C) ?
FATHMM MKL Coding Pred (C) ?
N of 6 Predicted Damaging ?
N of 6 Predicted Tolerated ?
MetaSVM Pred ?
MetaLR Pred ?
GERP++ RS ?
CADD Score (Phred Scale) 4.68
Ada Score ?
RF Score ?
PDIVAS Score ?
ConSplice Score ?
REVEL Score ?

Quality Metrics

Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above