12:21616841 T / C

dbSNP
rs10841821
Allele Frequency
0.03161
Allele Count
76 / 2404
UCSC
12-21616841-T-C
ClinVar
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Ensembl
Click to search for variant in Ensembl
gnomAD Browser
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Site Quality
1515.78
Filter Status
PASS
 Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Number of Heterozygotes Homozygous Genotype Freq. Heterozygous Genotype Freq. Allele Frequency
Arab 4 204 2 0 0.0196 0.0 0.01961
Azeri 10 200 5 0 0.05 0.0 0.05
Baloch 6 202 3 0 0.0297 0.0 0.0297
Gilaki 2 198 1 0 0.0101 0.0 0.0101
Kurd 4 200 2 0 0.02 0.0 0.02
Lur 8 200 4 0 0.04 0.0 0.04
Mazani 14 200 7 0 0.07 0.0 0.07
Persian 2 200 1 0 0.01 0.0 0.01
Persian Gulf Islander 8 200 4 0 0.04 0.0 0.04
Sistani 8 200 4 0 0.04 0.0 0.04
Turkmen 4 200 2 0 0.02 0.0 0.02
Zartoshti 6 200 2 2 0.02 0.02 0.03
Total 76 2404 37 2 0.030782029950083195 0.0016638935108153079 0.03161
Annotations

This variant falls on 5 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.

Additional Annotations
Metric Prediction
SIFT Pred (C) ?
Polyphen2 HVAR Pred (C) ?
MutationTaster Pred (C) ?
MutationAssessor Pred (C) ?
FATHMM Pred (C) ?
FATHMM MKL Coding Pred (C) ?
N of 6 Predicted Damaging ?
N of 6 Predicted Tolerated ?
MetaSVM Pred ?
MetaLR Pred ?
GERP++ RS ?
CADD Score (Phred Scale) 2.441
Ada Score ?
RF Score ?
PDIVAS Score ?
ConSplice Score ?
REVEL Score ?

Quality Metrics

Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above