12:21620952 _ / T

dbSNP
rs34425665
Allele Frequency
0.01082
Allele Count
26 / 2404
UCSC
12-21620952-_-T
ClinVar
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Ensembl
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gnomAD Browser
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Site Quality
540.83
Filter Status
PASS
 Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Number of Heterozygotes Homozygous Genotype Freq. Heterozygous Genotype Freq. Allele Frequency
Arab 0 204 0 0 0.0 0.0 0
Azeri 0 200 0 0 0.0 0.0 0
Baloch 2 202 1 0 0.0099 0.0 0.009901
Gilaki 2 198 1 0 0.0101 0.0 0.0101
Kurd 0 200 0 0 0.0 0.0 0
Lur 0 200 0 0 0.0 0.0 0
Mazani 4 200 2 0 0.02 0.0 0.02
Persian 2 200 1 0 0.01 0.0 0.01
Persian Gulf Islander 2 200 1 0 0.01 0.0 0.01
Sistani 6 200 3 0 0.03 0.0 0.03
Turkmen 2 200 1 0 0.01 0.0 0.01
Zartoshti 6 200 3 0 0.03 0.0 0.03
Total 26 2404 13 0 0.010815307820299502 0.0 0.01082
Annotations

This variant falls on 5 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.

Additional Annotations
Metric Prediction
SIFT Pred (C) ?
Polyphen2 HVAR Pred (C) ?
MutationTaster Pred (C) ?
MutationAssessor Pred (C) ?
FATHMM Pred (C) ?
FATHMM MKL Coding Pred (C) ?
N of 6 Predicted Damaging ?
N of 6 Predicted Tolerated ?
MetaSVM Pred ?
MetaLR Pred ?
GERP++ RS ?
CADD Score (Phred Scale) 0.665
Ada Score ?
RF Score ?
PDIVAS Score ?
ConSplice Score ?
REVEL Score ?

Quality Metrics

Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above