12:21623122 T / G


Site Quality
170715.0
Filter Status
PASS
Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Number of Heterozygotes Homozygous Genotype Freq. Heterozygous Genotype Freq. Allele Frequency
Arab 69 204 14 41 0.1373 0.402 0.3382
Azeri 67 200 11 45 0.11 0.45 0.335
Baloch 90 202 20 50 0.198 0.495 0.4455
Gilaki 69 198 16 37 0.1616 0.3737 0.3485
Kurd 51 200 7 37 0.07 0.37 0.255
Lur 71 200 15 41 0.15 0.41 0.355
Mazani 79 200 18 43 0.18 0.43 0.395
Persian 52 200 6 40 0.06 0.4 0.26
Persian Gulf Islander 83 200 19 45 0.19 0.45 0.415
Sistani 101 200 32 37 0.32 0.37 0.505
Turkmen 83 200 16 51 0.16 0.51 0.415
Zartoshti 42 200 5 32 0.05 0.32 0.21
Total 857 2404 179 499 0.14891846921797006 0.4151414309484193 0.3565
Annotations

This variant falls on 4 transcripts in 2 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.

Additional Annotations
Metric Prediction
SIFT Pred (C) ?
Polyphen2 HVAR Pred (C) ?
MutationTaster Pred (C) ?
MutationAssessor Pred (C) ?
FATHMM Pred (C) ?
FATHMM MKL Coding Pred (C) ?
N of 6 Predicted Damaging ?
N of 6 Predicted Tolerated ?
MetaSVM Pred ?
MetaLR Pred ?
GERP++ RS ?
CADD Score (Phred Scale) 0.973
Ada Score ?
RF Score ?
PDIVAS Score ?
ConSplice Score ?
REVEL Score ?

Quality Metrics

Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above