12:21626168 C / T

dbSNP
rs12371829
Allele Frequency
0.01581
Allele Count
38 / 2404
UCSC
12-21626168-C-T
ClinVar
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Ensembl
Click to search for variant in Ensembl
gnomAD Browser
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Site Quality
1133.92
Filter Status
PASS
 Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Number of Heterozygotes Homozygous Genotype Freq. Heterozygous Genotype Freq. Allele Frequency
Arab 3 204 1 1 0.0098 0.0098 0.01471
Azeri 4 200 2 0 0.02 0.0 0.02
Baloch 4 202 2 0 0.0198 0.0 0.0198
Gilaki 3 198 1 1 0.0101 0.0101 0.01515
Kurd 2 200 1 0 0.01 0.0 0.01
Lur 2 200 1 0 0.01 0.0 0.01
Mazani 4 200 1 2 0.01 0.02 0.02
Persian 2 200 1 0 0.01 0.0 0.01
Persian Gulf Islander 2 200 1 0 0.01 0.0 0.01
Sistani 6 200 2 2 0.02 0.02 0.03
Turkmen 2 200 1 0 0.01 0.0 0.01
Zartoshti 4 200 2 0 0.02 0.0 0.02
Total 38 2404 16 6 0.013311148086522463 0.004991680532445923 0.01581
Annotations

This variant falls on 2 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.

Additional Annotations
Metric Prediction
SIFT Pred (C) ?
Polyphen2 HVAR Pred (C) ?
MutationTaster Pred (C) ?
MutationAssessor Pred (C) ?
FATHMM Pred (C) ?
FATHMM MKL Coding Pred (C) ?
N of 6 Predicted Damaging ?
N of 6 Predicted Tolerated ?
MetaSVM Pred ?
MetaLR Pred ?
GERP++ RS ?
CADD Score (Phred Scale) 3.735
Ada Score ?
RF Score ?
PDIVAS Score ?
ConSplice Score ?
REVEL Score ?

Quality Metrics

Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above