12:21629769 T / C

dbSNP
rs73082666
Allele Frequency
0.03286
Allele Count
79 / 2404
UCSC
12-21629769-T-C
ClinVar
Click to search for variant in Clinvar
Ensembl
Click to search for variant in Ensembl
gnomAD Browser
Click to search for variant in gnomAD Browser
Site Quality
21473.1
Filter Status
PASS
 Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Number of Heterozygotes Homozygous Genotype Freq. Heterozygous Genotype Freq. Allele Frequency
Arab 11 204 0 11 0.0 0.1078 0.05392
Azeri 4 200 0 4 0.0 0.04 0.02
Baloch 3 202 0 3 0.0 0.0297 0.01485
Gilaki 12 198 2 8 0.0202 0.0808 0.06061
Kurd 11 200 1 9 0.01 0.09 0.055
Lur 7 200 0 7 0.0 0.07 0.035
Mazani 7 200 1 5 0.01 0.05 0.035
Persian 8 200 0 8 0.0 0.08 0.04
Persian Gulf Islander 1 200 0 1 0.0 0.01 0.005
Sistani 5 200 0 5 0.0 0.05 0.025
Turkmen 0 200 0 0 0.0 0.0 0
Zartoshti 10 200 0 10 0.0 0.1 0.05
Total 79 2404 4 71 0.0033277870216306157 0.05906821963394343 0.03286
Annotations

This variant falls on 2 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.

Additional Annotations
Metric Prediction
SIFT Pred (C) ?
Polyphen2 HVAR Pred (C) ?
MutationTaster Pred (C) ?
MutationAssessor Pred (C) ?
FATHMM Pred (C) ?
FATHMM MKL Coding Pred (C) ?
N of 6 Predicted Damaging ?
N of 6 Predicted Tolerated ?
MetaSVM Pred ?
MetaLR Pred ?
GERP++ RS ?
CADD Score (Phred Scale) 6.335
Ada Score ?
RF Score ?
PDIVAS Score ?
ConSplice Score ?
REVEL Score ?

Quality Metrics

Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above