12:21632539 G / A

dbSNP
rs112163602
Allele Frequency
0.02329
Allele Count
56 / 2404
UCSC
12-21632539-G-A
ClinVar
Click to search for variant in Clinvar
Ensembl
Click to search for variant in Ensembl
gnomAD Browser
Click to search for variant in gnomAD Browser
Site Quality
1690.53
Filter Status
PASS
 Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Number of Heterozygotes Homozygous Genotype Freq. Heterozygous Genotype Freq. Allele Frequency
Arab 6 204 3 0 0.0294 0.0 0.02941
Azeri 4 200 2 0 0.02 0.0 0.02
Baloch 3 202 1 1 0.0099 0.0099 0.01485
Gilaki 3 198 1 1 0.0101 0.0101 0.01515
Kurd 4 200 1 2 0.01 0.02 0.02
Lur 1 200 0 1 0.0 0.01 0.005
Mazani 8 200 3 2 0.03 0.02 0.04
Persian 3 200 1 1 0.01 0.01 0.015
Persian Gulf Islander 3 200 1 1 0.01 0.01 0.015
Sistani 0 200 0 0 0.0 0.0 0
Turkmen 4 200 2 0 0.02 0.0 0.02
Zartoshti 17 200 4 9 0.04 0.09 0.085
Total 56 2404 19 18 0.015806988352745424 0.014975041597337771 0.02329
Annotations

This variant falls on 2 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.

Additional Annotations
Metric Prediction
SIFT Pred (C) ?
Polyphen2 HVAR Pred (C) ?
MutationTaster Pred (C) ?
MutationAssessor Pred (C) ?
FATHMM Pred (C) ?
FATHMM MKL Coding Pred (C) ?
N of 6 Predicted Damaging ?
N of 6 Predicted Tolerated ?
MetaSVM Pred ?
MetaLR Pred ?
GERP++ RS ?
CADD Score (Phred Scale) 0.477
Ada Score ?
RF Score ?
PDIVAS Score ?
ConSplice Score ?
REVEL Score ?

Quality Metrics

Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above