12:21639513 G / A


Site Quality
2696.79
Filter Status
PASS
Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Number of Heterozygotes Homozygous Genotype Freq. Heterozygous Genotype Freq. Allele Frequency
Arab 2 204 0 2 0.0 0.0196 0.009804
Azeri 1 200 0 1 0.0 0.01 0.005
Baloch 1 202 0 1 0.0 0.0099 0.00495
Gilaki 0 198 0 0 0.0 0.0 0
Kurd 0 200 0 0 0.0 0.0 0
Lur 0 200 0 0 0.0 0.0 0
Mazani 2 200 0 2 0.0 0.02 0.01
Persian 1 200 0 1 0.0 0.01 0.005
Persian Gulf Islander 1 200 0 1 0.0 0.01 0.005
Sistani 0 200 0 0 0.0 0.0 0
Turkmen 1 200 0 1 0.0 0.01 0.005
Zartoshti 0 200 0 0 0.0 0.0 0
Total 9 2404 0 9 0.0 0.0074875207986688855 0.003744

Additional Annotations
Metric Prediction
SIFT Pred (C) Damaging
Polyphen2 HVAR Pred (C) Probably damaging
MutationTaster Pred (C) Damaging
MutationAssessor Pred (C) Predicted functional (medium)
FATHMM Pred (C) Tolerated
FATHMM MKL Coding Pred (C) Damaging
N of 6 Predicted Damaging 5 of 6 Predicted as Damaging
N of 6 Predicted Tolerated 1 of 6 Predicted as Tolerated
MetaSVM Pred Damaging
MetaLR Pred Damaging
GERP++ RS 5.81
CADD Score (Phred Scale) 31
Ada Score ?
RF Score ?
PDIVAS Score ?
ConSplice Score ?
REVEL Score 0.68

Quality Metrics

Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above