12:21644667 G / A


Site Quality
663584.0
Filter Status
PASS
Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Number of Heterozygotes Homozygous Genotype Freq. Heterozygous Genotype Freq. Allele Frequency
Arab 77 204 14 49 0.1373 0.4804 0.3775
Azeri 85 200 21 43 0.21 0.43 0.425
Baloch 105 202 30 45 0.297 0.4455 0.5198
Gilaki 85 198 18 49 0.1818 0.4949 0.4293
Kurd 70 200 11 48 0.11 0.48 0.35
Lur 78 200 17 44 0.17 0.44 0.39
Mazani 91 200 21 49 0.21 0.49 0.455
Persian 69 200 7 55 0.07 0.55 0.345
Persian Gulf Islander 86 200 15 56 0.15 0.56 0.43
Sistani 114 200 37 40 0.37 0.4 0.57
Turkmen 94 200 23 48 0.23 0.48 0.47
Zartoshti 69 200 11 47 0.11 0.47 0.345
Total 1023 2404 225 573 0.18718801996672213 0.4767054908485857 0.4255
Annotations

This variant falls on 8 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.

Additional Annotations
Metric Prediction
SIFT Pred (C) ?
Polyphen2 HVAR Pred (C) ?
MutationTaster Pred (C) ?
MutationAssessor Pred (C) ?
FATHMM Pred (C) ?
FATHMM MKL Coding Pred (C) ?
N of 6 Predicted Damaging ?
N of 6 Predicted Tolerated ?
MetaSVM Pred ?
MetaLR Pred ?
GERP++ RS ?
CADD Score (Phred Scale) 1.177
Ada Score ?
RF Score ?
PDIVAS Score ?
ConSplice Score ?
REVEL Score ?

Quality Metrics

Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above